ICB Supported Publications

Displaying 1 - 20 of 1048

A 65nm CMOS Living-Cell Dynamic Fluorescence Sensor with 1.05fA Sensitivity at 600/700nm Wavelengths

Fatemeh Aghlmand, Chelsea Hu, Saransh Sharma, Krishna K. Pochana, Richard M. Murray, Azita Emami

Habituation of the stress response multiplex to repeated cold pressor exposure

Bullock T, MacLean MH, Santander T, Boone AP, Babenko V, Dundon NM, Stuber A, Jimmons L, Raymer J, Okafor GN, Miller MB, Giesbrecht B and Grafton ST
Frontiers in Physiology,
10.3389/fphys.2022.752900

Addressable and adaptable intercellular communication via DNA messaging

John P. Marken and Richard M. Murray
bio Rxiv,
10.1101/2022.11.17.516988

Integrase-mediated differentiation circuits improve evolutionary stability of burdensome and toxic functions in E. coli

Rory L. Williams and Richard M. Murray
Nature Communications,
10.1038/s41467-022-34361-y

Modeling the metabolic evolution of mixotrophic phytoplankton in response to rising ocean surface temperatures

Logan M. Gonzalez, Stephen R. Proulx and Holly V. Moeller
BMC Ecology and Evolution,
10.1186/s12862-022-02092-9

Characterization of Integrase and Excisionase Activity in Cell-free Protein Expression System Using a Modeling and Analysis Pipeline

Ayush Pandey, Makena L. Rodriguez, William Poole and Richard M. Murray
bio Rxiv,
10.1101/2022.10.05.511053

Reinforcement learning with associative or discriminative generalization across states and actions: fMRI at 3T and 7T

Jaron T. Colas, Neil M. Dundon, Raphael T. Gerraty, Natalie M. Saragosa-Harris, Karol P. Szymula, Koranis Tanwisuth, J. Michael Tyszka, Camilla van Geen, Harang Ju, Arthur W. Toga, Joshua I. Gold, Dani S. Bassett, Catherine A. Hartley, Daphna Shohamy, Scott T. Grafton, John P. O'Doherty
Human Brain Mapping,
10.1002/hbm.25988

Investigating Search Among Physical and Virtual Objects Under Different Lighting Conditions

IEEE Transactions on Visualization and Computer Graphics,
10.1109/TVCG.2022.3203093

Cascading effects of prey identity on gene expression in a kleptoplastidic ciliate

Christopher Paight, Matthew D. Johnson, Erica Lasek-Nesselquist, Holly V. Moeller
Journal of Eukaryotic Microbiology,
10.1111/jeu.12940

Diagnosing Vision-and-Language Navigation: What Really Matters

Wanrong Zhu, Yuankai Qi, Pradyumna Narayana, Kazoo Sone, Sugato Basu, Xin Eric Wang, Qi Wu, Miguel P. Eckstein, William Yang Wang
Proceedings of 2022 Annual Conference of the North American Chapter of the Association for Computational Linguistics (NAACL),
10.48550/arXiv.2103.16561

Imagination-Augmented Natural Language Understanding

Yujie Lu , Wanrong Zhu, Xin Eric Wang, Miguel Eckstein, William Yang Wang
Proceedings of 2022 Annual Conference of the North American Chapter of the Association for Computational Linguistics (NAACL),

A multi-stage single photochrome system for controlled photoswitching responses

Friedrich Stricker, David M. Sanchez, Umberto Raucci, Neil D. Dolinski, Manuel S. Zayas, Jan Meisner, Craig. J. Hawker, Todd. J. Martínez & Javier Read de Alaniz
Nature Chemistry,
10.1038/s41557-022-00947-8

Extracellular Optogenetics at the Interface of Synthetic Biology & Materials Science

Lisa K. Mansson, Angela A. Pitenis, and Maxwell Z. Wilson
Frontiers in Bioengineering and Biotechnology,
10.3389/fbioe.2022.903982

M3L: Language-based Video Editing via Multi-Modal Multi-Level Transformers

Tsu-Jui Fu, Xin Eric Wang, Scott Grafton, Miguel Eckstein, William Yang Wang
Proceedings of Thirty-Third IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR),
10.48550/arXiv.2104.01122

Mucin O-glycans are natural inhibitors of Candida albicans pathogenicity

Julie Takagi, Kazuhiro Aoki, Bradley S. Turner, Sabrina Lamont, Sylvain Lehoux, Nicole Kavanaugh, Megha Gulati, Ashley Valle Arevalo, Travis J. Lawrence, Colin Y. Kim, Bhavya Bakshi, Mayumi Ishihara, Clarissa J. Nobile, Richard D. Cummings, Daniel J. Wozniak, Michael Tiemeyer, Rachel Hevey & Katharina Ribbeck
Nature Chemical Biology,
10.1038/s41589-022-01035-1

Trans-Radial Electrical Bioimpedance Velocimetry: A Novel Method for Detecting Cardiac Contractility

Alexandra I. Stump, Neil M. Dundon, Viktoriya Babenko, Alan Macy, Scott T. Grafton
bioRxiv ,
10.1101/2022.06.05.494836

Tunable Temperature-Sensitive Transcriptional Activation Based on Lambda Repressor

Lealia L. Xiong, Michael A. Garrett, Marjorie T. Buss, Julia A. Kornfield, and Mikhail G. Shapiro
ACS Synthetic Biology,
10.1021/acssynbio.2c00093

Biocatalytic Carbene Transfer Using Diazirines

Nicholas J. Porter, Emma Danelius, Tamir Gonen, and Frances H. Arnold
Journal of the American Chemical Society,
10.1021/jacs.2c02723

BioCRNpyler: Compiling chemical reaction networks from biomolecular parts in diverse contexts.

William Poole, Ayush Pandey, Andrey Shur, Zoltan A. Tuza, Richard M. Murray
PLOS Computational Biology,
10.1371/journal.pcbi.1009987

Decision Heuristics in Contexts Exploiting Intrinsic Skill

Neil M. Dundon, Jaron T. Colas, Neil Garrett, Viktoriya Babenko, Elizabeth Rizor, Dengxian Yang, Máirtín MacNamara, Linda Petzold, Scott T. Grafton
bioRxiv,
10.1101/2022.04.01.486746
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